RESTing-state fMRI data analysis toolkit (REST) Manual Xiaowei Song1, Xiangyu Long1, Yufeng Zang1 1 State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing 100875, China. May 10, 2008 Thank Xiangyu Long very much for this English manual! -- Xiaowei Song Content Some abbreviations........................................................................................................... 1 1. What can you do by REST............................................................................................. 1 2. Notice before using REST ............................................................................................. 2 3. Start to use REST toolbox ............................................................................................. 3 3.1 Installation .............................................................................................................. 3 3.2 Remove the REST .................................................................................................... 3 3.3 Start REST ............................................................................................................... 3 3.4 Regional homogeneity analysis ................................................................................ 4 3.4.1 What is regional homogeneity analysis ............................................................... 4 3.4.2.1 Remove linear trend (optional) ........................................................................ 6 3.4.2.2 Temporal filter (optional)................................................................................ 7 3.4.2.3 Setting the input data ...................................................................................... 9 3.4.2.4 Define the mask option ....................................................................................
